PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G21140.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 133aa    MW: 14942.4 Da    PI: 8.0015
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G21140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191970256
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                     +y+GVr+++ +g+++AeIrd s    +  r++lg+f+taeeAa+a+++ + +++g+
  OGLUM09G21140.1 19 KYRGVRRRP-WGKFAAEIRDSSR---HgVRVWLGTFDTAEEAARAYDRSAYSMRGA 70
                     8********.**********432...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MDHHHQQQQQ QQEGELVAKY RGVRRRPWGK FAAEIRDSSR HGVRVWLGTF DTAEEAARAY  60
DRSAYSMRGA NAVLNFPADA HIYARQLHNN NAAAGSSSSS SAAAAAARPP PIEFEYLDDH  120
VLQEMLRDHT TNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.14e-33ERF family protein