PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G21150.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 213aa    MW: 23204 Da    PI: 8.7586
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G21150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.7e-1664111555
              AP2   5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      GVr ++ +g+++AeIrd    + k +r++lg+f+++e Aa a+++a+ + +g
  OGLUM09G21150.1  64 GVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAAMAYDQAAFSVRG 111
                      ******.**********32..2.24**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSDRDVDMHI LTALMADMAD SSSSSSSSSS SDDSDMRASA AAAEPEHRRS PAPPPPPRQQ  60
QLIGVRKRPW GKFAAEIRDS TRKGARVWLG TFDSPEAAAM AYDQAAFSVR GASAVLNFPL  120
HRVQESLQAL ALGAAGGSPV LALKRRHSIR KRRKPTKHML LMQQQQQEPT VVELEDLGAD  180
YLEELLRLSE SSSSSSSSSI SNFTTTPNRH CQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-36ERF family protein