PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G02950.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family B3
Protein Properties Length: 138aa    MW: 15194.4 Da    PI: 10.8662
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G02950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3383e-126643597
                     EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                      l+l++++g + ++++  +   ++ ++t+GWkeF++a gL++g++++F++ +rs++  +v+++
  OGLUM10G02950.1  6 SLRLKTSHGLKIKIRI--KEAASTLYMTTGWKEFAEATGLETGETILFRMPSRSKA--RVMLL 64
                     599*************..999999*************************8777666..55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MQHGDSLRLK TSHGLKIKIR IKEAASTLYM TTGWKEFAEA TGLETGETIL FRMPSRSKAR  60
VMLLNRQCLT RCPVKTPSTT SSDKNRSLSP SDQLTRASTC AHPSTSKSIP PLRNGTGSTK  120
RSIADTSFCH QLKLTAEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.19e-10B3 family protein