PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G03910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 486aa    MW: 54368.7 Da    PI: 4.3755
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G03910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.97.2e-31331651128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkya.tgkrknra.....tksgyWkatg 87 
                      l pG++F P+deelv++yL+ k+e+++l++ ++i+evdi++++P +L +k+k+ +e++wyfF+ r+ +++ +++++nr+     +++g W+atg
  OGLUM10G03910.1  33 LSPGYHFVPSDEELVDYYLRGKIEQRRLPM-DFINEVDIMSFDPVKLIEKYKGyGENRWYFFTVRKPSKTkKKDEPNRKvvvdgVEEGSWSATG 125
                      579***************************.99**************8555554888*****9988766615779999656666679******* PP

              NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +   ++ k +++++g+k++L++   +a+++e+ +W mhey +
  OGLUM10G03910.1 126 SVAYICGKdHETVIGTKRVLTYK--SARSAEEDKWSMHEYVM 165
                      ******99667779********9..5666669********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MTAESNGGNS SSAATTVSNG GRRRHELVPK LRLSPGYHFV PSDEELVDYY LRGKIEQRRL  60
PMDFINEVDI MSFDPVKLIE KYKGYGENRW YFFTVRKPSK TKKKDEPNRK VVVDGVEEGS  120
WSATGSVAYI CGKDHETVIG TKRVLTYKSA RSAEEDKWSM HEYVMLDKSQ MDQYVLCAIQ  180
LKQTYEAENK AQEEEERGVK RKRTATRKRR KGDIDQTTSQ EQEDQQQETP PPGDPHDQSV  240
VDAPYYSMQM TLGGEEEVAP VPWCADCMAQ PDRIEYPAVW YNQQEQQPLQ LVDRSMMTQG  300
YIGDLSYIQN QFDQQQAHDH GSINAFDEAL DQCHDTNFAW DNAGIYPGNN LIDGNLDDDT  360
QDQFGNQATL GAFTGELEYG TGYQFHDALQ ATPGSDDASA QSRGIQPAAG HSMGDDDEAC  420
CNDDLSSLLA DISRILLDGN GVINNAGNPE GSNQGLLICK DGHQWPLEES TMPTVECVLQ  480
HPGESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.15e-23NAC family protein