PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G06920.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 361aa    MW: 40371.7 Da    PI: 4.7017
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G06920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.49.1e-136211969128
              NAM  69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++g+++  + k+gyWk  g+ + ++s  +  vg+k tL  y+g+ap+g++t Wvm+ey +
  OGLUM10G06920.1  62 KNGENAIIKSKTGYWKVVGTVRILTS--TVIVGMKVTLDHYEGQAPSGKRTGWVMNEYLI 119
                      345555557889*******9776666..899***************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MSSKVPGLAL LNTSISKSWS DEELVRFLAE RKEAHSLPEN VFVGMNISLI DPRNSDDPQS  60
PKNGENAIIK SKTGYWKVVG TVRILTSTVI VGMKVTLDHY EGQAPSGKRT GWVMNEYLIE  120
HNDEANLPQD YKNLCTIFFQ GDDILNAGDK QICLNANVPN ERKEFYLQYL AELEEQNAAW  180
NNQAVSVNEQ DVSSSKGLDG QKTSAADDQS VNHAPSREGY IELNDFLNSD SSASTSEYSS  240
QRTMISEEYF DSDAFLREIR NDHNAADEEH TDSKFSVAAA SKSDCVVISP PEQGFVNNLD  300
NHATITGDSP QKSVQNDKVD EHSRSMILRH AILVRTGCLN RFMPDLLIEH SQRRLQVLKQ  360
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-13NAC family protein