PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G07640.4

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 572aa MW: 66060.9 Da PI: 6.6723

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G07640.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	21.8	5.3e-07	15	104	32	128
NAM 32 evikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124 +++ vd++ ++P+d p + w+ + ++ y +++ r++k+gyWk ++ + +++ g+k L f++g++p g+++ +m OGLUM10G07640.4 15 NILVGVDLTMIDPRDSP------GTLWFLNWPdNQLCYDDENNVFRKAKNGYWKCVDA-CRIQT-GTSILGVKLCLEFHEGQTPCGTRSGLMMY 100 55677777788888777......2345443330344566778888999****8866.56766.8999********************* PP NAM 125 eyrl 128 ey + OGLUM10G07640.4 101 EYLI 104 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MFLAERKTWD PLPQNILVGV DLTMIDPRDS PGTLWFLNWP DNQLCYDDEN NVFRKAKNGY 60 WKCVDACRIQ TGTSILGVKL CLEFHEGQTP CGTRSGLMMY EYLIEQNDEL NLPQAYKSLC 120 RMFLQEDRKI VEDEHISLNL GVHHNFLGSY SQYLAEIQRQ NMVMNSQTKK VSSSENWMNE 180 KARNGQAQGS TDKRFLIFGV YVTDHLFDNQ LKLLNIITRL NNYLELMIEE PRFSSIAYVR 240 LDSQVKKLDK EYTSAMDLSS SLHQMLQKLN LRVQDEEVWV SQLGSNLQAS FRKIMDTSSE 300 IGKLEDEVLQ LKVDIAEFAP GEVTSCAVYE MIKTLQIVEL FMNNSTRHLK LIDGINSEMR 360 EFGSIFNGKV RCLVRFARYQ QTIMEKSTQI INFLGDIRAK VDKMTQMYGL SEVVPIDSNQ 420 FIEGSFNADA YGTCSYYATL SSVESLYKRE YASYPTILKD KIGQPDEFLV NLSRAQLEDI 480 VEDFYTRHKV KGSKRLNVCL DKMKNEGVIS EESYMNPQAQ MRMKEHIFLT KIKKVIESHI 540 MDGKVLIASF RITTGCYLIK STKFQKKIPN MN

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MFLAERKTWD PLPQNILVGV DLTMIDPRDS PGTLWFLNWP DNQLCYDDEN NVFRKAKNGY  60
WKCVDACRIQ TGTSILGVKL CLEFHEGQTP CGTRSGLMMY EYLIEQNDEL NLPQAYKSLC  120
RMFLQEDRKI VEDEHISLNL GVHHNFLGSY SQYLAEIQRQ NMVMNSQTKK VSSSENWMNE  180
KARNGQAQGS TDKRFLIFGV YVTDHLFDNQ LKLLNIITRL NNYLELMIEE PRFSSIAYVR  240
LDSQVKKLDK EYTSAMDLSS SLHQMLQKLN LRVQDEEVWV SQLGSNLQAS FRKIMDTSSE  300
IGKLEDEVLQ LKVDIAEFAP GEVTSCAVYE MIKTLQIVEL FMNNSTRHLK LIDGINSEMR  360
EFGSIFNGKV RCLVRFARYQ QTIMEKSTQI INFLGDIRAK VDKMTQMYGL SEVVPIDSNQ  420
FIEGSFNADA YGTCSYYATL SSVESLYKRE YASYPTILKD KIGQPDEFLV NLSRAQLEDI  480
VEDFYTRHKV KGSKRLNVCL DKMKNEGVIS EESYMNPQAQ MRMKEHIFLT KIKKVIESHI  540
MDGKVLIASF RITTGCYLIK STKFQKKIPN MN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-11	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G07640.4