PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G08720.3
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 161aa    MW: 17368.4 Da    PI: 11.3892
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G08720.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.26e-148715366127
              NAM  66 kkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127
                      +k+++++r+ r+++ g+Wka+ ++k+v sk  +g +vg k t+vfy    + ++++ kt+W mhe++
  OGLUM10G08720.3  87 TKARNKRRPMRVADGGTWKASDESKTVRSKkvGGIDVGQKFTMVFYerrFEGDQNPIKTNWGMHEFT 153
                      46678899********************99888899**********43313456678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MGTAAAAVEA TATMGSGRGR RRWCRSTART GTACLSASTS SPRTWSSSPS SCASSSEERS  60
PAPSTTSSSI SGYLNSTPPS SMRQFATKAR NKRRPMRVAD GGTWKASDES KTVRSKKVGG  120
IDVGQKFTMV FYERRFEGDQ NPIKTNWGMH EFTKIIPGTK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.14e-07NAC family protein