PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G08930.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 237aa    MW: 26236.1 Da    PI: 10.1927
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G08930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM805e-25612201127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLpk........................kvkaeekew.yfFskr..dk 66 
                      +p+Gf F P+d el    ++k v+g+   + ++v+++++i++++P  L++                         +++ e+ + yfFs+r  + 
  OGLUM10G08930.1  61 MPVGFYFVPKDLELFAILMCKLVRGEVPGAlNNVFEHIRILEFHPALLHAaitedlkpcssssssspamacaetYIENMEDGCiYFFSRRlfAA 154
                      699**************99999*99996551456999***********8558999******999999988776534444444459999984446 PP

              NAM  67 kyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127
                      k+++++r+ r+++ g+Wka+g +k+v sk  +g +vg k t+vfy    + +++++kt+W mhey+
  OGLUM10G08930.1 155 KARNKRRPMRVANGGTWKASGGSKTVRSKkvGGIDVGQKLTMVFYerrFEGDQNPVKTNWAMHEYT 220
                      666899*********************99888899**********44313466779*********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAYAVVRNPM PDGGEFIPRH TTREQPADGD GGGSGGSNNN NGKLKGKEKV VPEYGKNRHG  60
MPVGFYFVPK DLELFAILMC KLVRGEVPGA LNNVFEHIRI LEFHPALLHA AITEDLKPCS  120
SSSSSSPAMA CAETYIENME DGCIYFFSRR LFAAKARNKR RPMRVANGGT WKASGGSKTV  180
RSKKVGGIDV GQKLTMVFYE RRFEGDQNPV KTNWAMHEYT KIIHGSKNQS NIKLKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.36e-12NAC family protein