PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G09010.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 494aa MW: 54035.3 Da PI: 5.992

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G09010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.7	5.4e-24	2	137	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkya..tgkrknratksgyWkatgkdk 90 +G+ F P+d el +k v g+ l++v+++++i++++P L+ + + +ee+ +yfF +r+ +++ +++r++r++k g+Wka+g +k OGLUM10G09010.1 2 LVGCYFVPKDLELFAILRCKLVCGQLpGALNNVFEHIRILEFHPALLHeTYIGKEEDgYIYFFNRRQFATKagNKRRPTRVAKGGTWKASGGSK 95 68**********665555555555334456799********84455554443559999998655533788999*********** PP NAM 91 evlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127 +v sk +g ++g k t++fy + ++++ kt+W mhe++ OGLUM10G09010.1 96 TVRSKkvGGIDIGQKLTMMFYerrFEGDRNPIKTNWGMHEFT 137 99888889*******43312456678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MLVGCYFVPK DLELFAILRC KLVCGQLPGA LNNVFEHIRI LEFHPALLHE TYIGKEEDGY 60 IYFFNRRQFA TKAGNKRRPT RVAKGGTWKA SGGSKTVRSK KVGGIDIGQK LTMMFYERRF 120 EGDRNPIKTN WGMHEFTKII DDSKNQKPGR STKRIGERCR RGVDEPSTSS ALPPPTPPRP 180 LPDMAGPSSA TPLLPLQLPD MAGQSSATPL LPLQLLGLAG SSSAMSLPVL QLPGMAGSSS 240 AMPLQLSLPG LAGEMMSMAD QANMASTSQA STPSSELLQD WYDEFEITYG AVTPPSPSTI 300 SWEAPQSSPM GWWPSPNGGL VQHDGYLRMA ADPTWYMLEH LLPTAAIPPE LMTPKKSSPA 360 PPPAVDHHHR LSPPHDAAGS NYNHPKLAGY NGGIQAQHEN QHHPQEPQPA LLVDGEDGYG 420 AMADSNDTQL GGTEFDTERI AEMDNTVLKY NEVFPDDDEV VAAPMMIDSG AMVQRDVMET 480 THSTIRALFR IDLW

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MLVGCYFVPK DLELFAILRC KLVCGQLPGA LNNVFEHIRI LEFHPALLHE TYIGKEEDGY  60
IYFFNRRQFA TKAGNKRRPT RVAKGGTWKA SGGSKTVRSK KVGGIDIGQK LTMMFYERRF  120
EGDRNPIKTN WGMHEFTKII DDSKNQKPGR STKRIGERCR RGVDEPSTSS ALPPPTPPRP  180
LPDMAGPSSA TPLLPLQLPD MAGQSSATPL LPLQLLGLAG SSSAMSLPVL QLPGMAGSSS  240
AMPLQLSLPG LAGEMMSMAD QANMASTSQA STPSSELLQD WYDEFEITYG AVTPPSPSTI  300
SWEAPQSSPM GWWPSPNGGL VQHDGYLRMA ADPTWYMLEH LLPTAAIPPE LMTPKKSSPA  360
PPPAVDHHHR LSPPHDAAGS NYNHPKLAGY NGGIQAQHEN QHHPQEPQPA LLVDGEDGYG  420
AMADSNDTQL GGTEFDTERI AEMDNTVLKY NEVFPDDDEV VAAPMMIDSG AMVQRDVMET  480
THSTIRALFR IDLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12910.1	3e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G09010.1