PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G09280.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 435aa MW: 45948.2 Da PI: 8.4982

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G09280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.6	6.5e-39	89	148	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC s++tkfCy+nny+++qPr+fCk C+ryWt+GGa+rnvPvG+grrknk++ OGLUM10G09280.1 89 PDKILPCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAGRRKNKNA 148 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MGECRGGGGD GLIKLFGKTI PVQPDAKDVQ QHSGSSSSST ESDVQETAAV AVADPSPRSE 60 VVDGESPPQP GGGAGSHQQQ QKEMKLKKPD KILPCPRCSS MDTKFCYFNN YNVNQPRHFC 120 KHCQRYWTAG GAMRNVPVGA GRRKNKNATA AAHFLHRVRA CAAAAAMPAA PHDATNATVL 180 SFGGGGGGHD APPVTLDLAD KMTRLGKEGL VAHARNADAA AACSEVSSNR DDEQIGNTVA 240 KPANGLQQHP PPPHHHHHSA MNGGGIWPYY TSGIAIPIYP AAPAYWGCMI PPPGAWSLPW 300 PATVQSQAIS SSSPPTSATP SVSSFTLGKH PREGGDHEAR DHHGNGKVWV PKTIRIDNAD 360 EVARSSIRSL FAFRGGDKAD DNNDDDGTGV HKLATTVFEP KRDGKTAKHP AITSLPRLHT 420 NPVALTRSAT FQEGS

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MGECRGGGGD GLIKLFGKTI PVQPDAKDVQ QHSGSSSSST ESDVQETAAV AVADPSPRSE  60
VVDGESPPQP GGGAGSHQQQ QKEMKLKKPD KILPCPRCSS MDTKFCYFNN YNVNQPRHFC  120
KHCQRYWTAG GAMRNVPVGA GRRKNKNATA AAHFLHRVRA CAAAAAMPAA PHDATNATVL  180
SFGGGGGGHD APPVTLDLAD KMTRLGKEGL VAHARNADAA AACSEVSSNR DDEQIGNTVA  240
KPANGLQQHP PPPHHHHHSA MNGGGIWPYY TSGIAIPIYP AAPAYWGCMI PPPGAWSLPW  300
PATVQSQAIS SSSPPTSATP SVSSFTLGKH PREGGDHEAR DHHGNGKVWV PKTIRIDNAD  360
EVARSSIRSL FAFRGGDKAD DNNDDDGTGV HKLATTVFEP KRDGKTAKHP AITSLPRLHT  420
NPVALTRSAT FQEGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	5e-39	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G09280.1