PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G09660.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 237aa    MW: 25909.5 Da    PI: 8.7717
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G09660.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.35e-092288162
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeek...ew.yfFs 62
                     lp+GfrF P+d+el+ + L  k++g +    l+ v+++++i++++P +L ++++ + +   ++ +fFs
  OGLUM10G09660.1 22 LPRGFRFVPQDQELL-DILDDKLRGAPldRALDAVFHDTRILDFHPAKLYATASRSLSlslSLpFFFS 88
                     799************.88*********53333456**************7432221112222246665 PP
2NAM40.86.8e-1311919254127
              NAM  54 eek.ewyfFskrdkkya...tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      ee+  +yfFs+ + k+a   ++k ++ra++ g+Wka   + ++++ +g  vg k ++ fy     kg++t+W mhe+ 
  OGLUM10G09660.1 119 EENgYIYFFSTIEFKAAkpkQKKWPRRAAQGGRWKAVLGSSQLVEVGGVPVGRKLSMEFY----VKGVRTNWGMHEFV 192
                      3332559**998777663335778899********98887888887**************....899*********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAAPGDGEEK KGAGSGKNKH GLPRGFRFVP QDQELLDILD DKLRGAPLDR ALDAVFHDTR  60
ILDFHPAKLY ATASRSLSLS LSLPFFFSGD GLGALGDLIL IRGGLDWFGG DAGMYAEDEE  120
NGYIYFFSTI EFKAAKPKQK KWPRRAAQGG RWKAVLGSSQ LVEVGGVPVG RKLSMEFYVK  180
GVRTNWGMHE FVRIVGPNIE VADLAVYRLH KLWTNGEEKP GDLAADVAAK STNQSGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.14e-08NAC family protein