PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G09700.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 348aa    MW: 37023 Da    PI: 5.0402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G09700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.41.6e-1177955127
              NAM  55 ek.ewyfFskrdkkya...tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      e+  +yfFs+ + k+a   ++k + ra++ g+Wka   + ++++ ++  vg k ++ fy     kg++t+W mhe+ 
  OGLUM10G09700.1   7 ENgYIYFFSTIEFKAAkpkQKKLPWRAAQGGRWKAVLGSSQMVEVGDVPVGRKLSMEFY----VKGVRTNWGMHEFV 79 
                      332559**9988877722234455699*******87666666666**************....899*********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MYAEDEENGY IYFFSTIEFK AAKPKQKKLP WRAAQGGRWK AVLGSSQMVE VGDVPVGRKL  60
SMEFYVKGVR TNWGMHEFVR IIGPNIEVAD LVVYRLHKLW TNGEEKPGDL AADGAAKSTN  120
QSGQASAADY YQTYQNAVSQ AYAYAPPYVL QPGWSQGYPY DVAAAPPTAP WPVCWAPPSA  180
PGSYDCCYAS TFSRPPPPPP IAASTLDKAP MTSTDHGAST NTSAATPAAN KKPPPPVAAT  240
ATTLGKIKGE VKGKAPTTTS TDHAGPTNTS APPAANYQPP PLQGTQHVFA SGVVVGHEDE  300
EGYLVVDEVN TWRNTQQLVL EDDDDDDDGD GRAASAGAGE GGTSASRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-06NAC family protein