PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G09710.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 329aa    MW: 36050.6 Da    PI: 4.7889
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G09710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.74.1e-18111363127
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvka.eekew..yfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      +G+rF P+d el+   L +k++g++  ++e ++++++i++++P +L +++++ ee+e   yfFs+ + +    k  +ra++ g+Wk     +++
  OGLUM10G09710.1  11 VGVRFLPKDLELL-GILDAKLRGSPlGPVEAIFHDTQILDFHPYKLYEMYAEdEEEEGyiYFFSTMQFRC--RKIVERAAQGGRWKVNNC-ETL 100
                      7************.67*********54555569*************743333133333347777776665..57899*********7655.344 PP

              NAM  93 lskkgelvglkktLvfyk..grapkgektdWvmheyr 127
                       + +g +vg k t+ fy+  g +++   t+W m+e++
  OGLUM10G09710.1 101 EV-GGVAVGRKFTMNFYEhiGGDNDLIWTNWGMQEFT 136
                      44.89************5336788889********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAAPEGQNKF VGVRFLPKDL ELLGILDAKL RGSPLGPVEA IFHDTQILDF HPYKLYEMYA  60
EDEEEEGYIY FFSTMQFRCR KIVERAAQGG RWKVNNCETL EVGGVAVGRK FTMNFYEHIG  120
GDNDLIWTNW GMQEFTRIIG PNKEFADLAV YRLYKKKITR GNGEEKPEDI AAASDGDTES  180
SMNKRRRVEA SAAAMALPPP PPPGTMMFMA DQANVASTSP LPQEWHGQFA NSAAAAPSPS  240
GCWPWAPPPT PSAVEPFSFW ASASAAIPPA ADHYHPPPPP QGGEYYSRHG AFSVAPVPAS  300
ACSTSPLPAA GTEGSYSQQQ EPPCELMEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184188KRRRV