PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G11380.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 124aa    MW: 13307.5 Da    PI: 8.8599
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G11380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.6e-211162155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++y+GVr+++ +g+++AeIrdp  +   +r++lg+f+taeeAa+a+++a+ + +g
  OGLUM10G11380.1 11 TKYRGVRRRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARAYDRAAYAQRG 62
                     69********.**********8333..4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MEDDRSKDTA TKYRGVRRRP WGKFAAEIRD PERGGARVWL GTFDTAEEAA RAYDRAAYAQ  60
RGAAAVLNFP AAAAAGRGGG AGGAASGSSS SSSAQRGRGD KIEFEYLDDK VLDDLLDDEK  120
YRGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-17ERF family protein