PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G13040.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 324aa    MW: 35623 Da    PI: 5.6091
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G13040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.85.3e-50111391129
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrF P+deelv++yL++kv+++++    ++ +vd++  ePw+Lp+ +k + +ewyfFs rd+kyatg+r+nratk+gyWkatgkd+ v++
  OGLUM10G13040.1  11 LPPGFRFCPSDEELVCFYLRNKVANHRVAS-GTLVDVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVHE 103
                      79*************************888.88***************87788899**********************************9999 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                        ++++vg++ktLvfy grap+g+kt+Wvmhe+rle
  OGLUM10G13040.1 104 GtTRAVVGMRKTLVFYLGRAPNGQKTTWVMHEFRLE 139
                      766778***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAGLREMEST LPPGFRFCPS DEELVCFYLR NKVANHRVAS GTLVDVDLHA REPWELPEVA  60
KLTAEEWYFF SFRDRKYATG SRTNRATKTG YWKATGKDRI VHEGTTRAVV GMRKTLVFYL  120
GRAPNGQKTT WVMHEFRLET PNSQPKEDWV LCRVFDKKKP STIEAEGGGS SGSDLFIPGA  180
TDGSTDPSSP TTMAPLLGSS PDPTVVDRFD HRSAAVPPLM VLMQGGGDQM ISGSGVHCSN  240
NDNSGSSSAL LNLTMLQYSF LEHRPTGDDM AVGAHFGTCQ GGNNDATMAL GMGFEEHGMG  300
EIIEMEPAWR QGGSNCVYRD ELYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.11e-76NAC family protein