PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G16690.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 318aa    MW: 34835.7 Da    PI: 4.9146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G16690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.71.2e-4951221122
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      +ppGfrFhPtdeelv +yL+kkv+++k++l +vi++vd+y++ePwdL+   ++e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk+v +
  OGLUM10G16690.1   5 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDVDLYRIEPWDLQ--GYEEQSEWYFFSYKDRKYPTGTRTNRATMTGFWKATGRDKAVRE 95 
                      69****************************.9***************8..345789*************************************9 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWv 122
                       +++l+g++ktLvfykgrap+g+ktdW+
  OGLUM10G16690.1  96 -RSRLIGMRKTLVFYKGRAPNGHKTDWI 122
                      .999***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDV DLYRIEPWDL QGYEEQSEWY  60
FFSYKDRKYP TGTRTNRATM TGFWKATGRD KAVRERSRLI GMRKTLVFYK GRAPNGHKTD  120
WIEEGWVVCR AFKKRTMQPP RSSIGAWEAS YSYHDPAIFV GGGEHFKQET AAELDGVAAA  180
AGANAFLRYS TRLAELPQLE SPPLPSQGSQ AASAVVDGEE DNADSSRRPG GGGGAAAAVT  240
TDWRAFDKFV ASQLSPEEQH TCRATDDDDM AALLLLDGGG QEDDAGRWLG SAGLLSAVAA  300
DATTDCGLGT SCVPGDIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.16e-85NAC family protein