PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G02250.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GRAS
Protein Properties Length: 76aa    MW: 8782.79 Da    PI: 8.2452
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G02250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS24.92.3e-08243336374
             GRAS 336 qaklllrkvksdg.yrveee..sgslvlgWkdrpLvsvSaWr 374
                      +a+ ll+ +++ g y+v ++   + ++++W++rpL++v+aWr
  OGLUM11G02250.1   2 EARKLLQSCGWAGpYEVRHDagGHGFFFCWHKRPLYAVTAWR 43 
                      6999******8888****884345678**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MEARKLLQSC GWAGPYEVRH DAGGHGFFFC WHKRPLYAVT AWRPAASRRG HTRSTKEISA  60
DNEQQMNDTY IQETID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.12e-09GRAS family protein