PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G02260.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GRAS
Protein Properties Length: 195aa    MW: 21383.8 Da    PI: 9.3842
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G02260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS39.77.2e-13156319374
             GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +e+aGF+ vpls+ a  + + ++r+++ +  + +e  g+l+l+W++rpL+s+SaWr
  OGLUM11G02260.1   1 MEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENKECGGCLLLCWSSRPLYSISAWR 56 
                      89*************************887999999*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEMAGFTGVP LSYAAIRKGN DMVRRCGLRR CENKECGGCL LLCWSSRPLY SISAWRPAAS  60
RGAGSGSERS ELINLYKRQR VLDLQLCGEE RFERMVGAHG TGARLPPIDE QVISMKLVTP  120
AKGTIELSRE KDPDLFYLAR CGLGGLGVVA EPSQSIFPIN PTTAHFHQIS LPIAVPRKPS  180
NLKHNLVPVG VLNRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.14e-13GRAS family protein