PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G07800.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 201aa    MW: 21606.2 Da    PI: 4.508
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G07800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63e-182069255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr +k +g+Wv+eIr+p   gk++r++lg+f ++e+Aa a++ a+++l+g
  OGLUM11G07800.1 20 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAAVAHDVAALRLRG 69
                     69****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MEVVVMQNGG GGGGGEMAGQ YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ESPEMAAVAH  60
DVAALRLRGR DARLNFPAIA HRFRRPDTAE PGDVRAAALE AAAQVRFTPD LLVVAGGDDA  120
GRRCCSAGEA EAEAVAAAAW EWDVVVGGGG DELEAKSPNM WAELAEAMLM APPVWEGGGE  180
TDNDEWAQQA ASLWDPSVWD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.12e-25ERF family protein