PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G13430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 241aa    MW: 25812.2 Da    PI: 9.0412
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G13430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.41.5e-33135193159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d++vv++tYeg+H+h+
  OGLUM11G13430.1 135 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSRDETVVVTTYEGTHTHP 193
                      59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MENFPILFAT QPTSSSTSSS YHFMSSSSGS HDHRHHHGLQ PGGNGGGGGS LSHGLFMGSS  60
SSSIRMEELS NSQQGGDVVV DGGATRSPHG GDGDGAAGDD GGDAQAAAAG GRKKGEKKER  120
RPRFAFQTRS QVDILDDGYR WRKYGQKAVK NNKFPRSYYR CTHQGCNVKK QVQRLSRDET  180
VVVTTYEGTH THPIEKSNDN FEHILTQMHI YSGLTPSSAA HASSSSPLFP SAAAAASHMF  240
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.14e-55WRKY family protein