PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G14240.3
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 300aa    MW: 33022.6 Da    PI: 6.7353
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G14240.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM119.63e-37181481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      l pGfrF+Ptd+elv +yL +++ + +l++  +i++vdi++++Pwd+   v ++ek  +fF++++ ky+ ++r+nr++ +g+W+a g++ +++ 
  OGLUM11G14240.3  18 LLPGFRFRPTDDELVIKYLYPRAFHVPLPC-AIITDVDIHQHNPWDIV-PVVEREKGKHFFTRKEVKYPGSRRSNRVAGNGFWRAAGSEVPIYY 109
                      579***************************.88**************5.455678999************************************ PP

              NAM  95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k     ++ lvg+++tLvf+ g+++++e+t+W mhe++l
  OGLUM11G14240.3 110 KpegaaDDMLVGMRRTLVFHYGKSRSAERTEWAMHEFQL 148
                      9877776777***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MANTGLSIPM VNGATIHLLP GFRFRPTDDE LVIKYLYPRA FHVPLPCAII TDVDIHQHNP  60
WDIVPVVERE KGKHFFTRKE VKYPGSRRSN RVAGNGFWRA AGSEVPIYYK PEGAADDMLV  120
GMRRTLVFHY GKSRSAERTE WAMHEFQLAG AGLLPRPMMR RATSNGSEPP CGCLEATIAK  180
KSDGLSATLH AKRDSAPLMR IMVEPDSSWV ICCIYKKRQR APPVVIPPVI GDVGEAIIPH  240
AIGDAREGQL HFIDFLGQPA RNDPSSPHSC TIDPSSLEEG SDESAGDGED KDGDGMNEAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-34NAC family protein