PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G17310.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 145aa    MW: 16142.1 Da    PI: 6.7906
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G17310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.68.7e-162484363
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                     + +re+r+ +NRe+ArrsR+RK++ ++eL ++v+ L+a N +   +++e+  ++a++++e+
  OGLUM12G17310.1 24 DHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNARVLARASEIAGQYARVEQEN 84
                     679*****************************************************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MSSSSLSPAG SSDGDSAGVV VAADHRREKR RLSNRESARR SRLRKQQHLD ELVQEVARLQ  60
ADNARVLARA SEIAGQYARV EQENTVLRAR AAELGDRLRS VNEVLRVVEE FSGVAMDIQE  120
ECPPDDPLLR PWQIPCPAAA HMLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13945RRSRLRK
23946RRSRLRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.11e-35bZIP family protein