PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G19700.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 259aa    MW: 27863.5 Da    PI: 6.6713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G19700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.8e-1581131255
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +++G++++k +grW AeIrd    +  k  r ++g+f+taeeAa a++a +++l+g
  OGLUM12G19700.1  81 RFHGIHRRK-SGRWSAEIRD----NmiKGSRSWVGTFDTAEEAAWAYDAVARRLYG 131
                      689***999.7*********....77455************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MCGENDDNGG AAGSSRRLPA VGAMRGPCGC EEKLKTTVVV VLSDDDDYEE EFRRYCENTT  60
LPAKGDKGGR RRPAASKKQH RFHGIHRRKS GRWSAEIRDN MIKGSRSWVG TFDTAEEAAW  120
AYDAVARRLY GPNARTNFPL PPPPPPPPVV VPLLPAPAVA NKKMNSKRKK PVVAAEMVAP  180
AGGEPAAAAG EMAPVLLGNA LEATNGWEFE PYSSMGLVVG GAVYNYADEP ETADELQLLH  240
LMHGGAMVDF AADGCLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-10ERF family protein