PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G19710.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 250aa    MW: 27048 Da    PI: 6.5058
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G19710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.42.1e-1477128256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +++G++ ++  grW AeIrd s +g   r+++g++ tae Aa+a++a +++++g+
  OGLUM12G19710.1  77 RFHGIHMRS-YGRWSAEIRDSSYRG--HRVWIGTYATAEAAARAYDAEARRIHGA 128
                      589999998.8*********65555..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MCGGCLIPDE PVGKPARRTR AAAAGGDSGD GGKHGRRLCP GAAPCNCKPR RRAGAADDDD  60
VGRRRRTTRT RAASEVRFHG IHMRSYGRWS AEIRDSSYRG HRVWIGTYAT AEAAARAYDA  120
EARRIHGAKA NTNFPPPPND DDINGAPPPW DLEAYMRFLG EVELDDGGAE PPPPLNGNPE  180
LHMELASATQ SVHGDDEPWG LDKYMRFLSE VELDDGGAPP PPTPSQHGGV AAGSPQYGCR  240
YDYLLLMMCN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15066RRRAGAADDDDVGRRRR