PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS95705

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB

Protein Properties

Length: 298aa MW: 33486.6 Da PI: 6.6279

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95705	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++k++G g+W++ ++ g+ R++k+c++rw +yl OIS95705 14 KGPWTPEEDEKLVEYIKKHGHGSWRSLPNLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49.2	1.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l OIS95705 67 RGPFSPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGRTPCCDKK GLKKGPWTPE EDEKLVEYIK KHGHGSWRSL PNLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF SPEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLFSMG 120 IDPLTHEPSN GLLRRPPTST SARHMAQWES ARLEAEARLS RESQLLVPSS AGRSETDYFL 180 RIWNSEIGEA FRKFKTEDKC QSPASQISSS TKYGSASGIT TEMDLTFAED TEWKDSQPYT 240 EDILQGSDTS SSSELEDSSE SALQLLLDFP SSNDMSFLGF LSESSLNCSL ADHRVGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-116	MYB family protein

Link Out ? help Back to Top
Ensembl	OIS95705