PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95762
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB
Protein Properties Length: 271aa    MW: 31808 Da    PI: 6.7852
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95762genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-172370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll++++   G g+W++ a++ g++Rt+k+c++rw++yl
         OIS95762 23 RGPWTLEEDNLLIHYISTNGEGRWNALAKCAGLKRTGKSCRLRWLNYL 70
                     89********************************************97 PP
2Myb_DNA-binding52.98.7e-1776119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
         OIS95762  76 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MSKNIVIMSN NSSNEDDQFE LRRGPWTLEE DNLLIHYIST NGEGRWNALA KCAGLKRTGK  60
SCRLRWLNYL KPDIKRGNLT PQEQLLILEL HSKWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKQARQLKV DCNSKKFVEA IKSLWMPRLL EKMEQSSSIE KHNPSLITPL INNQEPYDKE  180
NSRMYSTDSM NMLKLQPNEM TKDVTIYNNS VQNECYHVES LSQQPDFSSQ EMSISECEVA  240
EAHWFSDEMA AASLWNMDEF WQFRKLGDID I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-90MYB family protein