PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95790
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 214aa    MW: 24640.9 Da    PI: 5.9649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95790genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.2e-1581128455
       AP2   4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +GVr +k +g++ AeIrd +     + kr++lg+f taeeA + +   ++++eg
  OIS95790  81 SGVRKRK-WGKYCAEIRDpF-----NkKRIWLGTFNTAEEASQVHQSKKLEFEG 128
               8***999.**********55.....34**************9998888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MKSQPKVADE SNEKQQREDE QIKIQRKIII KISDPDATES SSSEEEEQEK RQPRKQQPKL  60
TVHEIFQDKV KTTTFPRKLP SGVRKRKWGK YCAEIRDPFN KKRIWLGTFN TAEEASQVHQ  120
SKKLEFEGKL KMAKIAKTKK AISEKSELES QTSDSSNGVE ELLMGQWIQI SDDKEVYFSL  180
KLGVPIVDNY GFLLGEFSEL DDLSISVCDV ENDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-19ERF family protein