PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS95802

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 437aa MW: 49072.3 Da PI: 4.6881

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95802	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105	9.7e-33	56	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatg 87 lp+G++F+Ptd+e++++ L k g++ + +e+i++vd i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++tg OIS95802 56 LPRGVKFDPTDQEIIWHLLGKVEVGNRsshpfI--DEFIPTVDeddgICYTHPQNLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKIHgdnfgDVRWHKTG 153 799**********777766544444575332..334665544556******.677888899**************86555555888* PP NAM 88 kdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++k+v+ +g + g+kk++v+y + k+ekt+Wvmh+y+l OIS95802 154 RTKPVIL-DGIQRGCKKIMVLYvsPVKGGKAEKTNWVMHQYHL 195 ***.99********6544777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MARPSWLVDS RRIATKIKSA SGDPGAVNWK SNPTKACPNC QFIIDNNDVS NDWPGLPRGV 60 KFDPTDQEII WHLLGKVEVG NRSSHPFIDE FIPTVDEDDG ICYTHPQNLP GVKQDGSVSH 120 FFHRAIKAYN TGTRKRRKIH GDNFGDVRWH KTGRTKPVIL DGIQRGCKKI MVLYVSPVKG 180 GKAEKTNWVM HQYHLGTGED EREGEYVMSK VFYQQQQQVK QGDKIEQELP EDADYLVAKV 240 DPHTPKSVTP EPPRGERISS SMDARQQIAA SSISPTTQYH DVDYTEDDMG ALPDQTENQD 300 QIIENQIDEA GTIVDNETGD DPKWWDSESQ YLLDSQQLVE GLSLCDDLLA SQSPNRDGNE 360 NDKEKKCKPS LADYAKLGPE DLKKDLEDCQ HLVLDPANID MDTPPDFRLS QLEFGSQDSY 420 IAWGGSKFGF DSGEHVG

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MARPSWLVDS RRIATKIKSA SGDPGAVNWK SNPTKACPNC QFIIDNNDVS NDWPGLPRGV  60
KFDPTDQEII WHLLGKVEVG NRSSHPFIDE FIPTVDEDDG ICYTHPQNLP GVKQDGSVSH  120
FFHRAIKAYN TGTRKRRKIH GDNFGDVRWH KTGRTKPVIL DGIQRGCKKI MVLYVSPVKG  180
GKAEKTNWVM HQYHLGTGED EREGEYVMSK VFYQQQQQVK QGDKIEQELP EDADYLVAKV  240
DPHTPKSVTP EPPRGERISS SMDARQQIAA SSISPTTQYH DVDYTEDDMG ALPDQTENQD  300
QIIENQIDEA GTIVDNETGD DPKWWDSESQ YLLDSQQLVE GLSLCDDLLA SQSPNRDGNE  360
NDKEKKCKPS LADYAKLGPE DLKKDLEDCQ HLVLDPANID MDTPPDFRLS QLEFGSQDSY  420
IAWGGSKFGF DSGEHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein

Link Out ? help Back to Top
Ensembl	OIS95802