PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95891
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 205aa    MW: 22814.4 Da    PI: 7.4394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95891genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.7e-17117167255
       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+++AeIrdp   + k  r++lg+f+   +Aa+a++ a+ k++g
  OIS95891 117 NYRGVRRRP-WGKFAAEIRDP---NkKGSRIWLGTFDADVDAARAYDCAAFKMRG 167
               59*******.**********9...4345**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTTPDEGLTL ELIRQHLLED FTSTELFINS LNSCFTDHIS PVFTSVKTEP STSNNSLSVS  60
LTSYPDSPIS HYFSDFPEFK TNSDTNLSPT SDSCVSSNST ISSDTTNSNN NENKVKNYRG  120
VRRRPWGKFA AEIRDPNKKG SRIWLGTFDA DVDAARAYDC AAFKMRGRKA ILNFPMDAGK  180
SGAPANIGRK RRRDNGIELE MLINL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189193RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-45ERF family protein