PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95912
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 245aa    MW: 27035.6 Da    PI: 4.5942
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95912genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-173685255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               ykGVr++  +g+WvAeIr+p   + r +r +lg+f   ++Aa a++aa++kl+g
  OIS95912 36 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFENSYDAAVAYDAAARKLYG 85
              69****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSSTYSVERK TKKITQATSR KGCMRGKGGP ENASCTYKGV RQRTWGKWVA EIREPNRGAR  60
LWLGTFENSY DAAVAYDAAA RKLYGADAKL NLPHLYNKQA QAQNSRPNTM GLDNAGGPVS  120
APPTCNPAAV YNVASPSTWS MGNDNTSFYF NNDFGNNSFS TADQTSFQFL DINQTAEEFD  180
ENNINQNEGI GGEMWRDLNM NLPEIDDSSI WEEAKASTSF QEAVNDPGIY ACNLDDGINY  240
PPWCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-40ERF family protein