PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96173
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 244aa    MW: 27279.4 Da    PI: 9.5028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96173genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08151191954
               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  OIS96173 151 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYMKFL 191
               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDIDLLKSAA PEDQMEMMLM MQMQDFSKGY SDMNEMPMLD CSPQGSSNIS NNTNANLSQM  60
IGYHNSHTFL NMPASTISFT GSPSVIQHQE ALRNAFGAYP SHTVKRNSMA AMREMIFKIA  120
AMQPIQIDPE SVKPPKRKNV KISNDPQSVA ARHRRERISE RIRILQRLVP GGTKMDTASM  180
LDEAIHYMKF LKKQVQSLEK VEATRPVAAA SGCLGFPVPM SSLSGNYLPM GSKTYYPYHQ  240
SVQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.15e-42bHLH family protein