PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96190
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB
Protein Properties Length: 273aa    MW: 30054.9 Da    PI: 6.6822
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96190genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.61.6e-191156147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W +eEdell ++v+++G+++W+ I++ m+ gR++k+c++rw + 
         OIS96190 11 KGPWNPEEDELLQRLVEEHGPRNWSIISKSMP-GRSGKSCRLRWCNQ 56
                     79******************************.***********985 PP
2Myb_DNA-binding57.82.5e-1865107347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++++G++ W+tIar +  gRt++++k++w++ 
         OIS96190  65 PFTAEEDETILKAHAKFGNK-WATIARLLS-GRTDNSIKNHWNST 107
                      89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
METIKETSRV KGPWNPEEDE LLQRLVEEHG PRNWSIISKS MPGRSGKSCR LRWCNQLSPQ  60
VEHRPFTAEE DETILKAHAK FGNKWATIAR LLSGRTDNSI KNHWNSTLKR KCPSTSADLS  120
FETPKQPLKR SSSIGPGTIS MNPGSPSESD LSDSGFPGFP QSNVYRAVTR PGEVLPPSVP  180
DPPTSLSLSL PGSGFKETTG RVTPQVAEPA PAPEPALSSA PGLMPQDLPV TENYSFGPSI  240
MEKQLFSPEF LAVLQDMIHK EVKNYMSGFE DKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.17e-74MYB family protein