PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96200
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 173aa    MW: 19069.5 Da    PI: 10.0829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96200genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-203080155
       AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              s+++GVr ++ +gr++AeIrd ++    + r +lg+f+taeeAa a+++a+++l+g
  OIS96200 30 SHFRGVRKRP-WGRYAAEIRDpWK----KSRRWLGTFDTAEEAALAYDEAARSLRG 80
              78********.**********883....5999**********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVAQSSTMCG GDGGGSQGNT SQPVRAPKES HFRGVRKRPW GRYAAEIRDP WKKSRRWLGT  60
FDTAEEAALA YDEAARSLRG PRAKTNFGLD GLAAVGPPPT LPKLPNWCFN ALYGSYLEDR  120
SRFGTGETTV ASSEYSGYKL QGVSVVLNEH EKKTKNEKKK PFLFDLNLPA PLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-23ERF family protein