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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIS96223 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 321aa MW: 36471.9 Da PI: 7.4438 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 180.1 | 5.6e-56 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
lppGfrFhPtdeel+++yL++kv++ ++++ ++i++vd++k+ePwdLp+k++ +ekewyf+s +d+ky+tg r+nrat++gyWk+tgkdke+++ +g lvg
OIS96223 5 LPPGFRFHPTDEELITFYLTNKVSNFSFSA-RAIADVDLNKCEPWDLPAKASMGEKEWYFYSLKDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-GGVLVG 103
79**************************99.89***************999999****************************************.****** PP
NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
+kktLvfykgrapkgekt+Wvmheyrle
OIS96223 104 MKKTLVFYKGRAPKGEKTNWVMHEYRLE 131
**************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 321 aa Download sequence |
MEEKLPPGFR FHPTDEELIT FYLTNKVSNF SFSARAIADV DLNKCEPWDL PAKASMGEKE 60 WYFYSLKDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGGV LVGMKKTLVF YKGRAPKGEK 120 TNWVMHEYRL ETRLGFKPSK EEWVVCRVFQ KSSTVKKPQP TSSSPQSLES PNCDTNTIIT 180 NELGDIELPI NFNCLANSSN GIISNNISLN NYNNENMNMN LNMNLASSLL NSSNLSSVNS 240 LLFRALQLRG YQPREATTNT HDYSFMPPLQ GNISQFGNDD HFSSNFVDNI GAVPSSSMVF 300 DNSVQQQQTQ EQPYKLDSNI W |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G18400.1 | 2e-95 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIS96223 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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