PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96244
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 259aa    MW: 30093.9 Da    PI: 4.2043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96244genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.22.1e-16299498
       NAM  4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
              G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ +   + +++++  yf ++++k+++t kr +r++ +++Wk + k +e+++k g+
  OIS96244  2 GHRFHPTDREVL-KYLIGFVRDEPLQSQNElMQVADLYADkEPWQIFEaydQGNNNNNTRYFITPQKKEKPTWKRVSRTVGKSTWKPQSKGREIKKK-GK 99
              99********99.9**********88877747777*997559****74232333344467**********************************995.33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGHRFHPTDR EVLKYLIGFV RDEPLQSQNE LMQVADLYAD KEPWQIFEAY DQGNNNNNTR  60
YFITPQKKEK PTWKRVSRTV GKSTWKPQSK GREIKKKGKP GDKKKGNNID EVVNDENMRD  120
IEEFINTVLQ QDVQVEDNGI RSNGIAKLDD QENNIIQYVE GDQVRDHVHG LLDSPEDIVD  180
VNDHEEYVED CVDEGDEVQV HLLKEYIDSV LQSEDVQAED NGMMSSNDQE NMEYQVEDNQ  240
HAIFWASAED VDLDTINFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-09NAC family protein