PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96356
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 225aa    MW: 26155.9 Da    PI: 9.2193
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96356genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.63.4e-16130219198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               f+k +++s+v+   +l lp +f+++h  k  ++  +tl de+  ++e k+   k++    l++GW++F+ +++L +gD +vF+l++ ++f  +v ++r
  OIS96356 130 FVKPMLQSHVTGGFWLGLPVHFCNTHLPK--RDEFVTLIDENEDEFETKYLALKRG----LSGGWRGFAIDHELVDGDALVFQLIEPTKF--KVYIIR 219
               89*********************999423..4457***************666665....9***********************987777..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVESKKKMLA YEESRLKRLE ENKKRMEELN LSKLVQAVRT ATSPNPSPMK KVKPRVKQEI  60
DRSAVRRSNR VADKPPPNYK EVPVEPLGKP RSYKRRDLLN RVYADDEDRQ YAIERAEQLQ  120
SEIDADFPSF VKPMLQSHVT GGFWLGLPVH FCNTHLPKRD EFVTLIDENE DEFETKYLAL  180
KRGLSGGWRG FAIDHELVDG DALVFQLIEP TKFKVYIIRV NQAED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-88B3 family protein