PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96410
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 218aa    MW: 23987.9 Da    PI: 5.411
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96410genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.62e-1559108255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr +  + rWv eIr p   +k+ r++lg++ tae+Aa+a++ a+ +l+g
  OIS96410  59 TYRGVRKRN-SDRWVGEIRQP---NKKLRIWLGTYPTAEMAARAHDVAAIALRG 108
               69****888.7*********8...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDMFRSYYSD PLTESSSLSE NSSSSCNRAN ISDEEVLLAS NNPKKQAGRK KFRETRHPTY  60
RGVRKRNSDR WVGEIRQPNK KLRIWLGTYP TAEMAARAHD VAAIALRGRS ACLNFAGSVW  120
KLPIPASADA KDIQRAAAEA AEAFGRPSES EADSGESAGT TPETPESSKF FMDEEALFCM  180
PGLLASMAEG LMLPPPHYVE VGDYVEAAAD MPLWSYTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.11e-59ERF family protein