PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96484

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 499aa MW: 56265.6 Da PI: 8.5671

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96484	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.1	3.1e-18	27	77	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ q+e Le+++++++yp+++++ eLA++lgLte+qV+ WF+ rR k+k+ OIS96484 27 KTRAQIEGLEKFYKEHKYPTESMKSELARSLGLTEKQVSGWFCHRRLKDKR 77 6899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MEDPVVMHSE DDKGHTEKNK TRIKVIKTRA QIEGLEKFYK EHKYPTESMK SELARSLGLT 60 EKQVSGWFCH RRLKDKRLLS RETYANGRQD RSSGVIQDRG SGFRQDSCGS TKQGDDKNFD 120 HREVESRRLT APEVSAAGVT YEVVTQYRAE SNLMEDTPSG SSSSLRDACF SQNVESFDMA 180 TSRYLSSNVP TDLKSVKPRT GPSGYLKVKG QVENAAITAV KRQLGSLYRQ DGPPLGVEFD 240 PLPPGAFESS VQNLVDEPEY AGEPVPALTP DFSKVYKQSN SCIGHGSISK TNSHVPDLEG 300 ASFKKSLKSA HPEYYFNEKP GQNSSIHDGD CYYLGRDSSI DMHKGSRREV AVDGRCNYKY 360 MAKHDGAEIR TSTSSSSGFR SPRTGKVNGE QVKPRFTSCN EMNLKIMEEE DLERKPSNFV 420 LKGSKHRYCP VRVLSSKVEK DYIHVDRPPV DENYNLDRVK IPWENEMRAA KRARDEDPNH 480 QEYPRNASGT QCHPRQIIR

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MEDPVVMHSE DDKGHTEKNK TRIKVIKTRA QIEGLEKFYK EHKYPTESMK SELARSLGLT  60
EKQVSGWFCH RRLKDKRLLS RETYANGRQD RSSGVIQDRG SGFRQDSCGS TKQGDDKNFD  120
HREVESRRLT APEVSAAGVT YEVVTQYRAE SNLMEDTPSG SSSSLRDACF SQNVESFDMA  180
TSRYLSSNVP TDLKSVKPRT GPSGYLKVKG QVENAAITAV KRQLGSLYRQ DGPPLGVEFD  240
PLPPGAFESS VQNLVDEPEY AGEPVPALTP DFSKVYKQSN SCIGHGSISK TNSHVPDLEG  300
ASFKKSLKSA HPEYYFNEKP GQNSSIHDGD CYYLGRDSSI DMHKGSRREV AVDGRCNYKY  360
MAKHDGAEIR TSTSSSSGFR SPRTGKVNGE QVKPRFTSCN EMNLKIMEEE DLERKPSNFV  420
LKGSKHRYCP VRVLSSKVEK DYIHVDRPPV DENYNLDRVK IPWENEMRAA KRARDEDPNH  480
QEYPRNASGT QCHPRQIIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-69	HB-other family protein

Link Out ? help Back to Top
Ensembl	OIS96484