PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96712
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 203aa    MW: 22617.5 Da    PI: 6.5435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96712genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.6e-1875124355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+++ +g
  OIS96712  75 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAALSTRG 124
               9*******.**********44465..**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDSSSLNLLY HLNINTSSLP FNVNDSDEML LYGLLAQETT SRDGSSVLAM GSRDSSNYEE  60
FSSVSESKPS KERTYRGVRR RPWGKFAAEI RDSTRNGIRV WLGTFDSAEA AALAYDQAAL  120
STRGSGAILN FPVERVVESL NGMKCYVEEG CSPVLALKKI HSMRKRKYNK VREVKKENVN  180
VIVFEDLGGD YLEQLLSSSD VIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-49ERF family protein