PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96860
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 89aa    MW: 10537 Da    PI: 10.0318
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96860genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.52.4e-11248246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     g+WTt   +++ +a +++  +   +W+ Iar +g g+++++++ ++  
         OIS96860  2 GSWTTKQNKRFEEALALYDRDtpdRWHNIARNVG-GKSAEEVRRHYEL 48
                     89*****************99*************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MGSWTTKQNK RFEEALALYD RDTPDRWHNI ARNVGGKSAE EVRRHYELLL KDIMQIENDQ  60
IPLPKYKPAL TNVRGYANEQ RLLKNLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-33MYB_related family protein