PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97058

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 260aa MW: 29204.4 Da PI: 9.3056

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97058	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.8e-12	69	120	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ +hn+ Er RR++ Ns + Lr+llP+ + + kK s ++ ++++YI +L OIS97058 69 KKLNHNASERDRRKKFNSLCSSLRSLLPPtD---HTKKISFPVTVARVIKYIPDL 120 6789***********************55...7777************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MMAFSSPLFC NFGVCLADPK NNKLNTIEAP VSTGIPVHYS SSQPNIVHRQ FKNSDEINGD 60 NDHLDGTLKK LNHNASERDR RKKFNSLCSS LRSLLPPTDH TKKISFPVTV ARVIKYIPDL 120 KKEVERLTQK KEDLTLRSIP KKEYSADFNK QTIIKGGIQS SLSVISANQV GNGEVIIHIS 180 ILKTNKSSFA EAVSELEEEG LLLLNSSSFE TLGDRVFYNL HFQAQGTLPI KVQILRDKLL 240 SYYEKEDKLL PPWISGSFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	1e-30	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIS97058