PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97219

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 306aa MW: 30991.4 Da PI: 6.6794

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97219	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.6e-12	99	144	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq OIS97219 99 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 144 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MLGNGDQNDG VGNPANDSSV QALFNGFTGS LGQNSSQPQH FLHPQGGTMQ AQSFGAPATA 60 PAMNQTPAAS GSAGGGTTPA AQPKQQRVRA RRGQATDPHS IAERLRRERI AERMKALQEL 120 VPNANKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGGAAA VAPLVADMSS EGRGEGNGGR 180 GGNGTASSSN NDSMTVTEHQ VAKLMEEDMG SAMQYLQGKG LCLMPISLAT AISTATCHSR 240 NPMIPNGNGG NNPLLGGGGG PATNGGGGEA GGPSSPNLSV LTVQSATIGN GGIDPSVKDA 300 TSVSEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	109	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-67	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIS97219