PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97425
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 250aa    MW: 28167.1 Da    PI: 5.0674
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97425genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.8e-17146196255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++  g+++AeIrdp +ng  +r +lg++ tae+Aa a+++a+ +++g
  OIS97425 146 RYRGVRQRP-CGKFAAEIRDPAKNG--ARAWLGTYETAEDAALAYDKAAYRIRG 196
               6********.7**********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMFENSEFIT NFELLESIRQ HLLEDWNSPL SNSENSTSLY STETQIFPNL FSDNWEKFPI  60
NENDTKNRYI YSNAITEHSA SAVKIEPEFS NFLENDTENM YIYNNAINEP TQSAVKTEPE  120
VSVSSPEMYN FTAPAAAPPR AKKAERYRGV RQRPCGKFAA EIRDPAKNGA RAWLGTYETA  180
EDAALAYDKA AYRIRGSRAL LNFPLRVDSG EPEPVRVGSK RSSISPESSS SSSSENVSTK  240
RTKKVAQLYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.14e-37ERF family protein