PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97527

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 280aa MW: 31793.5 Da PI: 5.6939

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97527	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	108	4.8e-34	40	96	3	59
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 + lkcprC s ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrnvPvGggr++++ OIS97527 40 PEPLKCPRCGSINTKFCYYNNYNKSQPRHYCKGCKRHWTEGGTLRNVPVGGGRKNKR 96 6789***********************************************977665 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGLSTNLVSL DDQGLDNWSQ NSLPELPEPP SIRRQPTPKP EPLKCPRCGS INTKFCYYNN 60 YNKSQPRHYC KGCKRHWTEG GTLRNVPVGG GRKNKRLRPT DPVDHITRME RVTLEVNDQR 120 CPLISTTVPT STIRGNITTL DEEKKESDIF YPTLPFDHTI SNFSKKPFNG NYNDIFSGLK 180 LDGNTHFSFS FDTVPCSLST QTSNICNEYM GKFDSTVEES TITTVKPITS NTDLLSQPWQ 240 IPETSNNVTE NMSSYWNWNE IDTLSTADLN IAWDDLEIKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38000.1	3e-28	Dof family protein

Link Out ? help Back to Top
Ensembl	OIS97527