PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97556
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 424aa    MW: 48962.1 Da    PI: 5.9975
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97556genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.74e-31263317155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r+rW+++LHerF+++v++LGG++kAtPk+il+lm+ +gLtl+hvkSHLQkYR 
  OIS97556 263 KTRIRWSEDLHERFLDCVNRLGGADKATPKQILNLMDSEGLTLDHVKSHLQKYRN 317
               68****************************************************6 PP
2Myb_DNA-binding48.52e-15267316348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rW+++++e+++d+v++lGg    t+k I + m  +g+tl ++ks++qky+
         OIS97556 267 RWSEDLHERFLDCVNRLGGAdkaTPKQILNLMDsEGLTLDHVKSHLQKYR 316
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MSIQRIFTQD RAHQSNEFSS DYTLDFPKIS AQDLVAQQQY SSYMGFCFQP EEGRRQQHQQ  60
SCNLPMISFF GSPSSAFFAT ERCLGLTQHD NQDNTSQLML NNNDLNQDHT SQLMIDNYDL  120
NQDNTSQLIN NYDIQLSSYD PQQSRNGFLT DSIAQPEPDF QHNISLPSFI RPEFSTSQPL  180
RRHYSFSDVS EKERMLHLKN ELLGEFDPSY RRHPSIPFDG NQNYSISHDF CGCPLEKMRQ  240
RCASPSLTSR NSASSGVSNK HSKTRIRWSE DLHERFLDCV NRLGGADKAT PKQILNLMDS  300
EGLTLDHVKS HLQKYRNAKH IPESTETGKS EKRNSPDNVT EIEAKTGIEI KEALKMQLEV  360
QRCLHEQLET QRTLQMRIEE QAKKLKRIFD RQQRTNRNLL ERQNSSISSP AQDDAEILDV  420
EDSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.13e-57G2-like family protein