PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97601
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 93aa    MW: 10617.1 Da    PI: 10.7438
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97601genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like57.43.3e-1829691556
   G2-like 15 veaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
              +e+v++  G+++ +Pkti++lm+v+gLt+e+v+SHLQkYRl+
  OIS97601 29 IEVVAHS-GIKNVVPKTIMQLMNVEGLTRENVASHLQKYRLY 69
              7888888.9*******************************85 PP
2Myb_DNA-binding24.18.6e-0838672248
                     T..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 22 g..tWktIartmg.kgRtlkqcksrwqkyl 48
                     +   +ktI++ m+ +g+t++++ s++qky+
         OIS97601 38 KnvVPKTIMQLMNvEGLTRENVASHLQKYR 67
                     45569************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MVPEPRSLPE QKQQSIRPPQ WQKTTNHRIE VVAHSGIKNV VPKTIMQLMN VEGLTRENVA  60
SHLQKYRLYM KRQGNEGPSS SDNLLNSTPV KQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.33e-30G2-like family protein