PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97610
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 245aa    MW: 27772.4 Da    PI: 6.3663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97610genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.1e-1269115354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               ++h+e+ErrRR+riNs +++Lr+ll  +      K +Ka+ L k+v+ +++L
  OIS97610  69 KNHKEAERRRRERINSHLDKLRTLLSCN-----SKTDKASLLAKVVQRVREL 115
               78***********************997.....7************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MQQENMLENL DFCHHLTENR SNENMGEYGF DIPAIKSFCS SSFYSQAVKF QETVESITTP  60
EARAIAASKN HKEAERRRRE RINSHLDKLR TLLSCNSKTD KASLLAKVVQ RVRELKQQTS  120
EIMQLDETNF PSETDEITVL SSNDCLADGR LLIKASLCCE DRFDLIPDLI ETLKSLGLSP  180
LRAEMVTLGG RIRNVIVLAV DKDHSSDESL LFLRDALRSI IQPSSYGTGE RSKRRRVLDQ  240
GTSNY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580ERRRRE
2233237KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.19e-66bHLH family protein