PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97633

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HSF

Protein Properties

Length: 135aa MW: 15478.8 Da PI: 5.1098

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97633	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	80.7	2.3e-25	23	81	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+y++++d++ ++++sw en ++fvv+++ efak+ Lp+yFkh+nf+SFvRQLn+Y OIS97633 23 FLTKTYQLVDDQSSNHIVSWGENDTTFVVWKPLEFAKEHLPNYFKHNNFSSFVRQLNTY 81 9*********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence
MSSSSEMNFT VQDCQRTIMA APFLTKTYQL VDDQSSNHIV SWGENDTTFV VWKPLEFAKE 60 HLPNYFKHNN FSSFVRQLNT YVAPVELFFI IRLDKIVGVG DVGFEGLIKV SLRMNDFSLL 120 TPDFMLEKIV SLSTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	3e-33	HSF family protein

Link Out ? help Back to Top
Ensembl	OIS97633