PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97640
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 255aa    MW: 29319.5 Da    PI: 9.4882
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97640genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.82.4e-1927116597
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
               ++++++ +++r+ +pk fa+e+g+++++  t++++d + r We++l y+ + g++++++ W++F+ an LkegD ++F+    +++++ +k++
  OIS97640  27 TVKPHHISKCRMHVPKLFARENGLSNTQC-TIVIRDYEQRLWEFRL-YSSSAGSTFIGGEWRKFCAANFLKEGDCIMFEIFA-KGEKPILKFY 116
               56899999**************9997765.****************.9999999*************************544.7777777765 PP
2B3469.4e-15165244891
               -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
        B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
               s+   +++ ++p +fa+e+g+ + ++  l+++de+ rsW+++l    + +r+++++ W eF  an+L++gD ++F+ + + +++
  OIS97640 165 SYGYPRSLWCIPTRFAAENGLTN-KNCGLIIRDETQRSWNLRL--YTSCSRVYIGGRWGEFRVANDLEVGDRIMFEIVTN-GEK 244
               6666777889*********7764.44579**************..889999*************************7764.443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSSYKAFPDV EAAKDMPLSR PDHFISTVKP HHISKCRMHV PKLFARENGL SNTQCTIVIR  60
DYEQRLWEFR LYSSSAGSTF IGGEWRKFCA ANFLKEGDCI MFEIFAKGEK PILKFYGKAN  120
ASLQPEEWKP NLDAERYQSL SIASAPRAHS QSLGKYQPLG LTLRSYGYPR SLWCIPTRFA  180
AENGLTNKNC GLIIRDETQR SWNLRLYTSC SRVYIGGRWG EFRVANDLEV GDRIMFEIVT  240
NGEKPIWKFH GKFSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.14e-20B3 family protein