PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97651
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family DBB
Protein Properties Length: 299aa    MW: 33165.2 Da    PI: 6.3091
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97651genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.22.9e-071143436
  zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
              + C+ ++   ++ fC+ +  +lC +C +++H  
  OIS97651 11 KLCDSCKATAATVFCKADMAFLCLSCDSKIHAA 43
              68******99*********************54 PP
2zf-B_box24.94.2e-085395339
  zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
               ++C+ +e+ +++  C+ +   lC +C + +H+       H++
  OIS97651 53 VWVCEVCEHAPASVTCKADAAALCVTCDQDIHSAnplarrHER 95
              689*****************************65777777876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MVAESWSATA KLCDSCKATA ATVFCKADMA FLCLSCDSKI HAANKLASRH ARVWVCEVCE  60
HAPASVTCKA DAAALCVTCD QDIHSANPLA RRHERFPIVP FYDSASAKSR GADEINPPHP  120
ETEEEAEAES WLLQTPNNNA QGIEYKSAEY LFSDVDQYVE MDMIKDQKPC TDIQLHVQEY  180
KDDCVVPHVQ NKNEIHLQGP VVNGYPTYEM DFSGSKPFMY NFSSQSISQS TNSAPPLSSS  240
GQPEYPRWTP HVPRKPLNRA KTHTWRTLHK ASPPLISATQ LANVARAPPD YASIPGYHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.13e-58CO-like family protein